, September 2017 — SMS : Smart Model Selection in PhyML. Molecular Biology and Evolution vol. 34, n° 9, p. 2422-2424 WOS:000408307400022
ISSN
0737-4038
, May 2017 — The tenth gene of HIV. M S-Medecine Sciences vol. 33, n° 5, p. 484-485 WOS:000405872400008
ISSN
0767-0974
, March 2017 — Inferring epidemiological parameters from phylogenies using regression-ABC: A comparative study. Plos Computational Biology vol. 13, n° 3, e1005416 WOS:000398031900041
ISSN
1553-734X
, March 2017 — The combinatorics of overlapping genes. Journal of Theoretical Biology vol. 415, , p. 90-101 WOS:000396964300011
ISSN
0022-5193
, November 2016 — In-depth analysis of HIV-1 drug resistance mutations in HIV-infected individuals failing first-line regimens in West and Central Africa. Aids vol. 30, n° 17, p. 2577-2589 WOS:000387206200003
ISSN
0269-9370
, October 2016 — Concomitant emergence of the antisense protein gene of HIV-1 and of the pandemic. Proceedings of the National Academy of Sciences of the United States of
America vol. 113, n° 41, p. 11537-11542 WOS:000384886900068
ISSN
0027-8424
, April 2016 — A ’Stochastic Safety Radius’ for Distance-Based Tree Reconstruction. Algorithmica vol. 74, n° 4, p. 1386-1403 WOS:000373640000007
ISSN
0178-4617
, January 2016 — Fast and accurate branch lengths estimation for phylogenomic trees. Bmc Bioinformatics vol. 17, , p. 23 WOS:000367709000001
ISSN
1471-2105
, January 2016 — Fast Dating Using Least-Squares Criteria and Algorithms. Systematic Biology vol. 65, n° 1, p. 82-97 WOS:000369955500006
ISSN
1063-5157
, October 2015 — FastME 2.0: A Comprehensive, Accurate, and Fast Distance-Based Phylogeny Inference Program. Molecular Biology and Evolution vol. 32, n° 10, p. 2798-2800 WOS:000361987100026
ISSN
0737-4038
, September 2015 — A phylotype-based analysis highlights the role of drug-naive HIV-positive individuals in the transmission of antiretroviral resistance in the UK. Aids vol. 29, n° 15, p. 1917-1925 WOS:000368492500001
ISSN
0269-9370
, 2014 — Predicting the Ancestral Character Changes in a Tree is Typically Easier than Predicting the Root State. Systematic Biology vol. 63, n° 3, p. 421-435 WOS:000334752600011
ISSN
1063-5157
, 2014 — Deep Conservation of Human Protein Tandem Repeats within the Eukaryotes. Molecular Biology and Evolution vol. 31, n° 5, p. 1132-1148 WOS:000335914400007
ISSN
0737-4038
, 2013 — Searching for virus phylotypes. Bioinformatics vol. 29, n° 5, p. 561-570 WOS:000315623000004
ISSN
1367-4803
, 2012 — Combinatorics of distance-based tree inference. Proceedings of the National Academy of Sciences of the United States of
America vol. 109, n° 41, p. 16443-16448
ISSN
0027-8424
, 2012 — Modeling Protein Evolution with Several Amino Acid Replacement Matrices Depending on Site Rates. Molecular Biology and Evolution vol. 29, n° 10, p. 2921-2936
ISSN
0737-4038
, 2012 — The Origin and Evolutionary History of HIV-1 Subtype C in Senegal. Plos One vol. 7, n° 3, e33579
ISSN
1932-6203
, 2012 — Branch Lengths on Birth-Death Trees and the Expected Loss of Phylogenetic Diversity. Systematic Biology vol. 61, n° 2, p. 195-203
ISSN
1063-5157
, 2012 — Computational discovery of regulatory elements in a continuous expression space. Genome Biology vol. 13, n° 11, R109
ISSN
1474-760X
, 2022 — From Genomics to Integrative Taxonomy? The Case Study of Pocillopora Corals. Abstract
With the advent of genomics, sequencing thousands of loci from hundreds
of individuals now appears feasible at… bioRxiv PREPRINT , , PREPRINT