, July 2024 — Deep learning of SARS-CoV-2 outbreak phylodynamics with contact tracing data. Deep learning has emerged as a powerful tool for phylodynamic analysis, addressing common computational limitations affecting… , , Type: 10.1101/2024.06.10.24308687
, 2024 — Accurate Detection of Convergent Mutations in Large Protein Alignments with ConDor. Abstract Evolutionary convergences are observed at all levels, from phenotype to DNA and protein sequences, and changes at… Genome Biology and Evolution vol. 16, n° 4, evae040
ISSN
1759-6653
, 2024 — Saltational Episodes of Reticulate Evolution in the Drosophila saltans Species Group. Phylogenomics reveals reticulate evolution to be widespread across taxa, but whether reticulation is due to low statistical… Molecular Biology and Evolution vol. 41, n° 12, msae250 Accession Number: 39661651 ISBN: 0737-4038 Publisher: Oxford University Press (OUP) Type: 10.1093/molbev/msae250
, 2024 — The Bayesian Phylogenetic Bootstrap, Application to Short Trees and Branches. Molecular Biology and Evolution , , msae238
ISSN
0737-4038, 1537-1719
, 2024 — Integrating contact tracing data to enhance outbreak phylodynamic inference: a deep learning approach. Molecular Biology and Evolution , , msae232
ISSN
0737-4038, 1537-1719
, 2024 — « Measures of Branch Support in Phylogenetics » in Models and Methods for Biological Evolution.. , , p. 213-234
ISBN
978-1-78945-069-9
, February 2024 — The genome of the blind bee louse fly reveals deep convergences with its social host and illuminates Drosophila origins. Social insects nests harbor intruders known as inquilines,1 which are usually related to their host.2,3 However, distant non… Current Biology - CB vol. 34, n° 5, 1122–1132.e5 ISBN: 0960-9822 Publisher: Elsevier Type: 10.1016/j.cub.2024.01.034
, 2024 — Genomic islands of divergence between Drosophila yakuba subspecies are predominantly driven by chromosomal inversions and the recombination landscape. During the early stages of local adaptation and speciation, genetic differences tend to accumulate at certain regions of the… Molecular Ecology vol. 34, n° 3, ISBN: 0962-1083 Publisher: Wiley Type: 10.1111/mec.17627