Hassanin Alexandre, Jullemier Eva, Chardonnet Bertrand & Robinson Terence J., May 2026 — Species delimitation based on phylogenetic analyses of males: A case study revealing the complex evolutionary history of giraffes. Molecular Phylogenetics and Evolution vol. 218, , p. 108571
ISSN
10557903
https://dx.doi.org/10.1016/j.ympev.2026.108571
Guilardi Mariana Dias, Slobosk Bruna Stefanie Silvério De Lima, Martins Ingrid Isabel, Duro Rodrigo Lopes Sanz, De Sousa Larissa Leão F., Cabral-Miranda Gustavo, Brandão Paulo Eduardo, Janini Luiz Mário Ramos, Gascuel Olivier, Hassanin Alexandre & Durães-Carvalho Ricardo, 2026 — Maternal-fetal detection of rabies virus in the vampire bat Desmodus rotundus , Brazil. EMI: Animal & Environment , , p. 1-31
ISSN
2998-6990
https://dx.doi.org/10.1080/29986990.2026.2644111
Curaudeau Manon, Kerbis Peterhans Julian, Le Flanchec Thomas, Gilissen Emmanuel, Granjon Laurent, Barale Lison, Gessain Antoine & Hassanin Alexandre, December 2025 — Squirrel reservoirs of monkeypox virus are sister species separated by the Sanaga River (Cameroon), as are the two main viral clades. Highlights: • Molecular polyphyly of a squirrel species reservoir of the monkeypox virus (MPXV). • New data on the distribution… One Health vol. 21, , p. 101157 Accession Number: 40808749 ISBN: 2352-7714 Type: 10.1016/j.onehlt.2025.101157
https://hal.inrae.fr/hal-05212140
Curaudeau Manon, Gessain Antoine & Hassanin Alexandre, February 2025 — A multidisciplinary approach to identifying animal reservoirs of monkeypox virus in Africa, Une approche pluridisciplinaire pour identifier les réservoirs animaux du virus du monkeypox en Afrique. Monkeypox virus (MPXV) was first described in 1958 in laboratory macaques originating from Asia, but epidemic outbreaks have… , , Issue: 2025UNIP7013
https://theses.hal.science/tel-05438044
Curaudeau Manon, Besombes Camille, Nakouné Emmanuel, Fontanet Arnaud, Gessain Antoine & Hassanin Alexandre, March 2023 — Identifying the Most Probable Mammal Reservoir Hosts for Monkeypox Virus Based on Ecological Niche Comparisons. Viruses vol. 15, n° 3, p. 727 Accession Number: 36992436 ISBN: 1999-4915 Publisher: MDPI Type: 10.3390/v15030727
ISSN
1999-4915
https://dx.doi.org/10.3390/v15030727
Sabroux Romain, Corbari Laure & Hassanin Alexandre, 2023 — Phylogeny of sea spiders (Arthropoda: Pycnogonida) inferred from mitochondrial genome and 18S ribosomal RNA gene sequences (vol 182, 107726, 2023). MOLECULAR PHYLOGENETICS AND EVOLUTION vol. 185, , Number: 107821 tex.earlyaccessdate: JUN 2023 tex.eissn: 1095-9513 tex.orcid-numbers: HASSANIN, Alexandre/0000-0002-4905-8540 tex.researcherid-numbers: HASSANIN, Alexandre/AAO-3327-2021 tex.unique-id: WOS:001057436000001
ISSN
1055-7903
https://dx.doi.org/10.1016/j.ympev.2023.107821
Veron Geraldine, Daniel Caroline, Pagani Paolo, San Emmanuel Do Linh, Kitchener Andrew C. & Hassanin Alexandre, 2023 — A tale of two African mongooses (Carnivora: Herpestidae): differing genetic diversity and geographical structure across a continent. Mammalian Biology vol. 103, n° 1, p. 37-52 tex.earlyaccessdate: OCT 2022 tex.eissn: 1618-1476 tex.orcid-numbers: Hassanin, Alexandre/0000-0002-4905-8540 Daniel, Caroline/0000-0002-7168-2411 Do Linh San, Emmanuel/0000-0002-6513-5665 tex.researcherid-numbers: Hassanin, Alexandre/AAP-8634-2020 tex.un
ISSN
1616-5047
https://dx.doi.org/10.1007/s42991-022-00321-8
Hassanin Alexandre & Rambaud Opale, 2023 — Retracing Phylogenetic, Host and Geographic Origins of Coronaviruses with Coloured Genomic Bootstrap Barcodes: SARS-CoV and SARS-CoV-2 as Case Studies. Phylogenetic trees of coronaviruses are difficult to interpret because they undergo frequent genomic recombination. Here, we… Viruses vol. 15, n° 2, p. 406
ISSN
1999-4915
https://dx.doi.org/10.3390/v15020406
Sabroux Romain, Corbari Laure & Hassanin Alexandre, 2023 — Phylogeny of sea spiders (Arthropoda: Pycnogonida) inferred from mitochondrial genome and 18S ribosomal RNA gene sequences. Molecular Phylogenetics and Evolution vol. 182, , p. 107726 Number: 107726 tex.earlyaccessdate: FEB 2023 tex.eissn: 1095-9513 tex.orcid-numbers: HASSANIN, Alexandre/0000-0002-4905-8540 Hassanin, Alexandre/0000-0002-4905-8540 tex.researcherid-numbers: HASSANIN, Alexandre/AAO-3327-2021 Hassanin, Alexandre/AAP-8634-2
ISSN
10557903
https://dx.doi.org/10.1016/j.ympev.2023.107726
Curaudeau Manon, Besombes Camille, Nakouné Emmanuel, Fontanet Arnaud, Gessain Antoine & Hassanin Alexandre, 2023 — Identifying the Most Probable Mammal Reservoir Hosts for Monkeypox Virus Based on Ecological Niche Comparisons. Viruses vol. 15, n° 3, p. 727
https://dx.doi.org/https://doi.org/10.3390/v15030727
Vidovszky MZ, Kapitány S, Gellért A, Harrach B, Görföl T, Boldogh SA, Kohl C, Wibbelt G, Müehldorfer K, Kemenesi G, Gembu GC, Hassanin A, Tu VT, Estók P, Horváth A et al., 2023 — Detection and genetic characterization of circoviruses in more than 80 bat species from eight countries on four continents. Abstract Several bat-associated circoviruses and circular rep-encoding single-stranded DNA (CRESS DNA) viruses have been… VETERINARY RESEARCH COMMUNICATIONS vol. 47, n° 3, p. 1561-1573
ISSN
0165-7380
https://dx.doi.org/10.1007/s11259-023-10111-3
Zhu Feng, Duong Veasna, Lim Xiao Fang, Hul Vibol, Chawla Tanu, Keatts Lucy, Goldstein Tracey, Hassanin Alexandre, Tu Vuong Tan, Buchy Philippe, Sessions October M., Wang Lin-Fa, Dussart Philippe & Anderson Danielle E., 2022 — Presence of Recombinant Bat Coronavirus GCCDC1 in Cambodian Bats. Viruses vol. 14, n° 2, p. 176
ISSN
1999-4915
https://dx.doi.org/10.3390/v14020176
Hassanin Alexandre, Rambaud Opale & Klein Dylan, 2022 — Genomic Bootstrap Barcodes and Their Application to Study the Evolution of Sarbecoviruses. Viruses vol. 14, n° 2, p. 440
ISSN
1999-4915
https://dx.doi.org/10.3390/v14020440
Hassanin Alexandre, 2022 — Variation in synonymous nucleotide composition among genomes of sarbecoviruses and consequences for the origin of COVID-19. Gene vol. 835, , p. 146641
ISSN
03781119
https://dx.doi.org/10.1016/j.gene.2022.146641
Sabroux Romain, Hassanin Alexandre & Corbari Laure, 2022 — Sea spiders (Arthropoda: Pycnogonida) collected during the Madibenthos Expedition from Martinique shallow waters. This study presents the inventory of sea spiders (Pycnogonida) sampled during the Madibenthos Expedition in Martinique (West… European Journal of Taxonomy vol. 851, , p. 1-141 Publisher: Muséum National d’Histoire Naturelle (MNHN) tex.hal_id: hal-03957149 tex.hal_version: v1
ISSN
2118-9773
https://dx.doi.org/10.5852/ejt.2022.851.1999
Curaudeau Manon, Besombes Camille, Nakouné Emmanuel, Fontanet Arnaud, Gessain Antoine & Hassanin Alexandre, 2022 — Identifying the most probable mammal reservoir hosts for Monkeypox virus based on ecological niche comparisons. Abstract Background Previous human cases or epidemics have suggested that Monkeypox virus (MPXV) can be transmitted through… PREPRINT vol. BIORXIV, , PREPRINT
https://dx.doi.org/DOI: 10.1101/2022.12.06.519416
Curaudeau Manon, Besombes Camille, Nakouné Emmanuel, Fontanet Arnaud, Gessain Antoine & Hassanin Alexandre, 2022 — Identifying the most probable mammal reservoir hosts for Monkeypox virus based on ecological niche comparisons. Abstract Background Previous human cases or epidemics have suggested that Monkeypox virus (MPXV) can be transmitted through… PREPRINT vol. BIORXIV, , PREPRINT
https://dx.doi.org/10.1101/2022.12.06.519416
Hassanin Alexandre & Rambaud Opale, 2022 — Retracing Phylogenetic, Host and Geographic Origins of Coronaviruses with Coloured Genomic Bootstrap Barcodes: SARS-CoV and SARS-CoV-2 as Case Studies. Phylogenetic trees of coronaviruses are difficult to interpret because they undergo frequent ge-nomic recombination. Here, we… LIFE SCIENCES - PREPRINT , , PREPRINT
https://dx.doi.org/DOI: 10.20944/preprints202212.0232.v1
Porrelli Stefano, Gerbault-Seureau Michele, Rozzi Roberto, Chikhi Rayan, Curaudeau Manon, Ropiquet Anne & Hassanin Alexandre, 2022 — Draft genome of the lowland anoa (Bubalus depressicornis) and comparison with buffalo genome assemblies (Bovidae, Bubalina). G3-GENES GENOMES GENETICS vol. 12, n° 11, tex.earlyaccessdate: SEP 2022 tex.orcid-numbers: Ropiquet, Anne/0000-0003-3755-5467 Hassanin, Alexandre/0000-0002-4905-8540 Curaudeau, Manon/0000-0003-3356-0701 Porrelli, Stefano/0000-0003-3878-7745 tex.researcherid-numbers: Ropiquet, Anne/E-6154-2011 Has
ISSN
2160-1836
https://dx.doi.org/10.1093/g3journal/jkac234
Besombes Camille, Mbrenga Festus, Schaeffer Laura, Malaka Christian, Gonofio Ella, Landier Jordi, Vickos Ulrich, Konamna Xavier, Selekon Benjamin, Dankpea Joella Namsenei, Von Platen Cassandre, Houndjahoue Franck Gislain, Ouaïmon Daniel Sylver, Hassanin Alexandre, Berthet Nicolas et al., 2022 — National Monkeypox Surveillance, Central African Republic, 2001–2021. Emerging Infectious Diseases vol. 28, n° 12, p. 2435-2445
ISSN
1080-6040, 1080-6059
https://dx.doi.org/10.3201/eid2812.220897