Forest Thomas, Achaz Guillaume, Marbouty Martial, Bignaud Amaury, Thierry Agnes, Koszul Romain, Milhes Marine, Lledo Joanna, Pons Jean-Marc & Fuchs Jerome, May 2024 — Chromosome-level genome assembly of the European green woodpecker Picus viridis. G3-GENES GENOMES GENETICS vol. 14, n° 5, tex.earlyaccessdate: MAR 2024 tex.orcid-numbers: Forest, Thomas/0000-0003-3911-5705 AGNES, THIERRY/0000-0002-1566-0664 Koszul, Romain/0000-0002-3086-1173 tex.unique-id: WOS:001191372700001
ISSN
2160-1836
https://dx.doi.org/10.1093/g3journal/jkae042
Overcast Isaac, Achaz Guillaume, Aguilée Robin, Andújar Carmelo, Arribas Paula, Creedy Thomas, Economo Evan, Etienne Rampal, Gillespie Rosemary, Jacquet Claire, Jay Flora, Kennedy Susan, Krehenwinkel Henrik, Lambert Amaury, Meramveliotakis Emmanouil et al., January 2023 — Towards a genetic theory of island biogeography: Inferring processes from multidimensional communityscale data. BackgroundMacArthur and Wilson’s theory of island biogeography has been a foundation for obtaining testable predictions from… Global Ecology and Biogeography vol. 32, , p. 4-23 ISBN: 1466-822X Publisher: Wiley Type: 10.1111/geb.13604
https://inserm.hal.science/inserm-04270149
Lorenzi Jean-Noël, Graner François, Courtier-Orgogozo Virginie & Achaz Guillaume, November 2023 — CNCA aligns small annotated genomes. We present CNCA, an online tool to align annotated genomes from GenBank files. It generates a nucleotide alignment that is then… , , Type: 10.5281/zenodo.8211992
https://hal.science/hal-04268598
Baldassari Sara, Picard Fabienne, Verbeek Nienke, van Kempen Marjan, Brilstra Eva, Lesca Gaetan, Conti Valerio, Guerrini Renzo, Bisulli Francesca, Licchetta Laura, Pippucci Tommaso, Tinuper Paolo, Hirsch Edouard, de Saint Martin Anne, Chelly Jamel et al., August 2019 — Correction: The landscape of epilepsy-related GATOR1 variants. The original version of this article contained an error in the spelling of the author Erik H. Niks, which was incorrectly given… Genetics in Medicine vol. 21, n° 8, p. 1896
https://hal-univ-bourgogne.archives-ouvertes.fr/hal-02066352
Forest Thomas, Portalier Swan, Steux Camille, Sackton Timothy & Achaz Guillaume, June 2024 — PopSize, a snpArcher module for population size change inference. The increasing scale of genomic datasets necessitates robust and scalable tools for demographic inference, especially for non… , ,
https://hal.science/hal-04599797
Dwivedi Nisha, Heighton Sean, Laso-Jadart Romuald, Verry Alexander, Nieto-Heredia Alba, Lesturgie Pierre, Khost Danielle, Bohec Mylène, Sackton Timothy, Chikhi Lounes, Orlando Ludovic, Hume Julian, Achaz Guillaume, Thèves Catherine, Mona Stefano et al., November 2025 — Combining population genomics with ancient DNA to understand island colonization history of the Madagascar turtle dove. Abstract The Mascarene archipelago (Mauritius, Reunion and Rodrigues), characterized by first human arrival being recent,… , , Type: 10.1101/2025.06.05.658009
https://hal.science/hal-05363598
Ferretti Luca, Schmiegelt Benjamin, Weinreich Daniel, Yamauchi Atsushi, Kobayashi Yutaka, Tajima Fumio & Achaz Guillaume, May 2016 — Measuring epistasis in fitness landscapes: The correlation of fitness effects of mutations. Journal of Theoretical Biology vol. 396, , p. 132-143
ISSN
1095-8541
https://dx.doi.org/10.1016/j.jtbi.2016.01.037
Delaporte Cécile, Achaz Guillaume & Lambert Amaury, 2016 — Mutational pattern of a sample from a critical branching population. Journal of Mathematical Biology vol. 73, , p. 627
ISSN
1432-1416
https://dx.doi.org/10.1007/s00285-015-0964-2
Lapierre Marguerite, Blin Camille, Lambert Amaury, Achaz Guillaume & Rocha Eduardo P. C., 2016 — The impact of selection, gene conversion, and biased sampling on the assessment of microbial demography. Molecular Biology and Evolution , n° 7, p. 1711-1725
ISSN
1537-1719
http://www.ncbi.nlm.nih.gov/pubmed/26931140
Suez Marie, Behdenna Abdelkader, Brouillet Sophie, Graça Paula, Higuet Dominique & Achaz Guillaume, 2016 — MicNeSs : genotyping microsatellite loci from a collection of (NGS) reads. Molecular Ecology Resources vol. 16, n° 2, p. 524-533
ISSN
1755098X
https://dx.doi.org/10.1111/1755-0998.12467
Ferretti Luca, Klassmann Alexander, Wiehe Thomas, Ramos-Onsins Sebastian E & Achaz Guillaume, 2016 — The expected neutral frequency spectrum of two linked sites. bioRxiv , ,
Lapierre Marguerite, Lambert Amaury & Achaz Guillaume, 2016 — Accuracy of demographic inferences from Site Frequency Spectrum: The case of the Yoruba population. bioR , , p. 078618
Régnier Claire, Achaz Guillaume, Lambert Amaury, Cowie Robert H., Bouchet Philippe & Fontaine Benoît, 2015 — Mass extinction in poorly known taxa. Proceedings of the National Academy of Sciences of the United States of America vol. 112, n° 25, p. 7761-7766
ISSN
0027-8424, 1091-6490
https://dx.doi.org/10.1073/pnas.1502350112
Vakirlis Nikolaos, Hebert Alex S., Opulente Dana A., Achaz Guillaume, Hittinger Chris Todd, Fischer Gilles, Coon Joshua J. & Lafontaine Ingrid, March 2018 — A Molecular Portrait of De Novo Genes in Yeasts. Molecular Biology and Evolution vol. 35, n° 3, p. 631-645
ISSN
1537-1719
https://dx.doi.org/10.1093/molbev/msx315
Matuszewski Sebastian, Hildebrandt Marcel E., Achaz Guillaume & Jensen Jeffrey D., 2018 — Coalescent Processes with Skewed Offspring Distributions and Nonequilibrium Demography. Genetics vol. 208, n° 1, p. 323-338
ISSN
1943-2631
https://dx.doi.org/10.1534/genetics.117.300499
Bridel Sébastien, Olsen Anne-Berit, Nilsen Hanne, Bernardet Jean-François, Achaz Guillaume, Avendaño-Herrera Ruben & Duchaud Eric, 2018 — Comparative Genomics of Tenacibaculum dicentrarchi and "Tenacibaculum finnmarkense" Highlights Intricate Evolution of Fish-Pathogenic Species. Genome biology and evolution vol. 10, n° 2, p. 452-457
ISSN
1759-6653
https://dx.doi.org/10.1093/gbe/evy020
Loire Etienne, Higuet Dominique, Netter Pierre & Achaz Guillaume, February 2013 — Evolution of Coding Microsatellites in Primate Genomes. Genome Biology and Evolution vol. 5, n° 2, p. 283-295
ISSN
1759-6653
https://dx.doi.org/10.1093/gbe/evt003
Ishida Saeko, Picard Fabienne, Rudolf Gabrielle, Noé Eric, Achaz Guillaume, Thomas Pierre, Genton Pierre, Mundwiller Emeline, Wolff Markus, Marescaux Christian, Miles Richard, Baulac Michel, Hirsch Edouard, Leguern Eric & Baulac Stéphanie, March 2013 — Mutations of DEPDC5 cause autosomal dominant focal epilepsies. Nature Genetics vol. 45, n° 5, p. 552-555
ISSN
1061-4036, 1546-1718
https://dx.doi.org/10.1038/ng.2601
Achaz Guillaume, Rodriguez-Verdugo Alejandra, Gaut Brandon S. & Tenaillon Olivier, 2014 — « The Reproducibility of Adaptation in the Light of Experimental Evolution with Whole Genome Sequencing » in Ecological Genomics.. vol. 781, , dir. Springer Netherlands p. 211-231
ISBN
978-94-007-7346-2 978-94-007-7347-9
http://link.springer.com/10.1007/978-94-007-7347-9_11