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, 2021 — Gene Similarity Networks Unveil a Potential Novel Unicellular Group Closely Related to Animals from the Tara Oceans Expedition (vol 12, pg 1664, 2020). Genome Biology and Evolution vol. 13, n° 8, evab140
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, 2021 — Modeling the evolution of interconnected processes: It is the song and the singers Tracking units of selection with interaction networks. BioEssays : news and reviews in molecular, cellular and developmental biology vol. 43, n° 1, e2000077
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, 2022 — Divergent genomic trajectories predate the origin of animals and fungi. Abstract
Animals and fungi have radically distinct morphologies, yet both evolved within the same eukaryotic supergroup:… Nature vol. 609, n° 7925, p. 1-7
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, 2018 — Tous entrelacés : une histoire de l’évolution. The Conversation , ,
, novembre 2019 — Search for unknown environmental sequences of medical/biological interest using large sequence similarity networks, Recherche de séquences environnementales inconnues d’intérêt médical/biologique par l’utilisation de grands réseaux de similarité de.... The objective of this thesis was to identify as yet unknown
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, octobre 2021 — RRNPP_detector: a tool to detect RRNPP quorum sensing systems in chromosomes, plasmids and phages of gram-positive bacteria. ABSTRACT Gram-positive bacteria (e.g. Firmicutes) and their mobile genetic elements (plasmids, bacteriophages) encode peptide… , , Type: 10.1101/2021.08.18.456871
, octobre 2021 — Large-scale identification of viral quorum sensing systems reveals density-dependent sporulation-hijacking mechanisms in bacteriophages. Communication between viruses supported by quorum sensing systems (QSSs) were found to optimize the fitness of temperate… , , Type: 10.1101/2021.07.15.452460
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, 2022 — Network analyses unveil ageing-associated pathways evolutionarily conserved from fungi to animals. GeroScience , ,
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, 2022 — Hundreds of Out-of-Frame Remodeled Gene Families in the Escherichia coli Pangenome. Molecular Biology and Evolution vol. 39, n° 1, msab329 Publisher: Oxford University Press (OUP) tex.hal_id: hal-03820636 tex.hal_version: v1
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, 2022 — Aging at Evolutionary Crossroads: Longitudinal Gene Co-expression Network Analyses of Proximal and Ultimate Causes of Aging in Bats. Molecular Biology and Evolution vol. 39, n° 1, msab302
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, 2022 — Tout se transforme ! Comment marche l’évolution. Illustrations Mélie Lychee.. , , dir. Circonflexe
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, 2022 — Le monde surprenant des microbes Virus, bactéries, archées.... , , dir. Editons Circonflexe
, 2023 — Interactomics: dozens of viruses, co-evolving with humans, including the influenza A virus, may actively distort human ageing. Abstract Some viruses (e.g. HIV-1, SARS-CoV-2) have been experimentally proposed to accelerate features of human ageing and of… MOLECULAR BIOLOGY AND EVOLUTION vol. 40, n° 2, msad012
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, 2023 — The leaderless communication peptide (LCP) class of quorum-sensing peptides is broadly distributed among Firmicutes. Abstract
The human pathogen Streptococcus pyogenes secretes a short peptide (leaderless communication peptide, LCP) that… Nature Communications vol. 14, n° 1, p. 5947
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, 2023 — Expanding evolutionary theories of ageing to better account for symbioses and interactions throughout the Web of Life. How, when, and why organisms age are fascinating issues that can only be fully addressed by adopting an evolutionary… Ageing Research Reviews vol. 89, , p. 101982
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, 2024 — Most genetic roots of fungal and animal aging are hundreds of millions of years old according to phylostratigraphy analyses of aging networks.. GEROSCIENCE , ,
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2509-2715