, 2024 — Most genetic roots of fungal and animal aging are hundreds of millions of years old according to phylostratigraphy analyses of aging networks.. GeroScience , ,
, avril 2023 — Large-Scale Identification of Known and Novel RRNPP Quorum-Sensing Systems by RRNPP_Detector Captures Novel Features of Bacterial, Plasmidic, and Viral Coevolution. Abstract Gram-positive Firmicutes bacteria and their mobile genetic elements (plasmids and bacteriophages) encode peptide-based… Molecular Biology and Evolution vol. 40, n° 4, ISBN: 0737-4038 Publisher: Oxford University Press (OUP) Type: 10.1093/molbev/msad062
, novembre 2019 — Search for unknown environmental sequences of medical/biological interest using large sequence similarity networks, Recherche de séquences environnementales inconnues d’intérêt médical/biologique par l’utilisation de grands réseaux de similarité de séquen. The objective of this thesis was to identify as yet unknown microorganisms present in various environments and to characterize… , ,
, 2019 — Benchmarking of alignment-free sequence comparison methods. Genome Biology vol. 20, n° 1, p. 144
ISSN
1474-760X
, 2022 — Proximate Drivers of Population-Level Lizard Gut Microbial Diversity: Impacts of Diet, Insularity, and Local Environment. Microorganisms vol. 10, n° 8, p. 1550
ISSN
2076-2607
, 2019 — Introducing trait networks to elucidate the fluidity of organismal evolution using palaeontological data. Genome Biology and Evolution vol. 11, n° 9, p. 2653-2665
ISSN
1759-6653
, 2019 — « The Methodology Behind Network Thinking: Graphs to Analyze Microbial Complexity and Evolution » in Evolutionary Genomics.. vol. 1910, , dir. Springer New York p. 271-308
ISBN
978-1-4939-9073-3 978-1-4939-9074-0
, 2019 — Phylosystemics: Merging Phylogenomics, Systems Biology, and Ecology to Study Evolution. Trends in Microbiology vol. 28, n° 3, p. 176-190
ISSN
0966842X
, avril 2019 — Networks Consolidate the Core Concepts of Evolution by Natural Selection. Trends in Microbiology vol. 28, n° 4, p. 254-265 tex.eissn: 1878-4380
tex.unique-id: ISI:000519578400005
ISSN
0966-842X
, 2020 — The Distribution of Genes Associated With Regulated Cell Death Is Decoupled From the Mitochondrial Phenotypes Within Unicellular Eukaryotic Hosts. Frontiers in Cell and Developmental Biology vol. 8, , p. 536389 tex.article-number: 536389
tex.unique-id: ISI:000575619800001
ISSN
2296-634X
, 2020 — Ancestral germen/soma distinction in microbes: Expanding the disposable soma theory of aging to all unicellular lineages. Ageing Research Reviews vol. 60, , p. 101064
ISSN
1568-1637
, 2020 — Rich repertoire of quorum sensing protein coding sequences in CPR and DPANN associated with interspecies and interkingdom communication. msystems vol. 5, n° 5, e00414–20 tex.article-number: e00414-20
tex.orcid-numbers: Lannes, Romain/0000-0002-6672-1762
tex.unique-id: ISI:000579368300039
ISSN
2379-5077
, septembre 2021 — Interspecific interactions that affect ageing: Age-distorters manipulate host ageing to their own evolutionary benefits. Ageing Research Reviews vol. 70, , p. 101375
ISSN
15681637
, 2021 — Harmful viruses and even friendly bacteria may cause premature ageing. New scientist , , p. 2281917 0.906
, 2018 — Topological support and data quality can only be assessed through multiple tests in reviewing Blattodea phylogeny. Molecular Phylogenetics and Evolution vol. 128, , p. 112-122
ISSN
1055-7903
, 2019 — Carbon Fixation by Marine Ultrasmall Prokaryotes. Highlighted in Contribution of Ultra-Small Microbes to Global Carbon Cycles.. Genome Biology and Evolution vol. 11, n° 4, p. 1166-1177
ISSN
1759-6653
, 2021 — The Epistemic Revolution Induced by Microbiome Studies: An Interdisciplinary View. Biology vol. 10, n° 7, p. 651
ISSN
2079-7737
, 2020 — Modeling the evolution of interconnected processes: It is the song and the singers. BioEssays , , p. 2000077 ISBN: 0265-9247 Publisher: Wiley-VCH Verlag Type: 10.1002/bies.202000077
, 2020 — Marine Ultrasmall Prokaryotes Likely Affect the Cycling of Carbon, Methane, Nitrogen, and Sulfur. Genome Biology and Evolution vol. 13, n° 1, evaa261
ISSN
1759-6653
, 2021 — Beyond arbitrium: identification of a second communication system in Bacillus phage phi3T that may regulate host defense mechanisms. Isme Journal vol. 15, n° 2, p. 545-549
ISSN
1751-7362