, juillet 2025 — Omics to Study and Manage Aquatic Environments: A Snapshot From the A qua E c O mics Meeting (EvianlesBains, 2025). The AquaEcOmics meeting brought together 280 scientists applying omics tools to aquatic research in March 2025 (Evian‐les‐Bains… Molecular Ecology vol. 34, n° 17, Accession Number: 40698877 ISBN: 0962-1083 Type: 10.1111/mec.70041
, juin 2025 — « Trait-based approach coupled to metatranscriptomic-derived sequence similarity network: towards the depiction of the functional diversity of freshwater microbial eukaryotes » in 16th International Congress of Protistology (ICOP/ISOP — 2025).. Microbial eukaryotes play a crucial role in biochemical cycles and aquatic trophic food webs. The recent advances in sequencing… , , tex.hal_id: hal-05134808 tex.hal_version: v1
, avril 2025 — Transcriptomic analyses reveal sexual cues in reproductive life stages of uncultivated Acantharia (Radiolaria). The ability to reproduce is a key process for the perpetuation of organisms. Along the evolution of protist reproductive… Protist vol. 177, , p. 126102 Accession Number: 40347573 ISBN: 1434-4610 Type: 10.1016/j.protis.2025.126102
, mars 2025 — AquaEcOmics meeting: exploring aquatic ecology through omics. March 17-20, 2025. Program and abstracts booklet. A meeting to explore aquatic ecosystems biodiversity, functionning and monitoring with eDNA and multi-Omics methods , , Pages: 135 p. Publication Title: AquaEcomics 2025 Type: 10.57745/VBSHUO
, février 2025 — « Metatranscriptomes-based sequence similarity networks uncover genetic signatures within parasitic freshwater microbial eukaryotes » in AquaEcOmics.. Microbial eukaryotes play a crucial role in biochemical cycles and aquatic trophic food webs. Their taxonomic and functional… Microbiome vol. 13, n° 1, p. 43 Type: 10.1186/s40168-024-02027-0
, 2025 — Metatranscriptomes-based sequence similarity networks uncover genetic signatures within parasitic freshwater microbial eukaryotes. Microbiome vol. 13, n° 1, p. 43 tex.hal_id: hal-04984439 tex.hal_version: v1
, 2025 — Ancient Microbiomes as Mirrored by DNA Extracted From CenturyOld Herbarium Plants and Associated Soil. Molecular Ecology Resources , , e14122
ISSN
1755-098X, 1755-0998
, 2025 — Omics to Study and Manage Aquatic Environments: A Snapshot From the <span style="font-variant:small-caps;">A</span> qua <span style="font-variant:small-caps;">E</span> c <span style="font-variant:small-caps;">O</span> mics Meeting (EvianlesBains, 2025). The AquaEcOmics meeting brought together 280 scientists applying omics tools to aquatic research in March 2025 (Evian‐les‐Bains… Molecular Ecology vol. 34, n° 17, e70041 Accession Number: 40698877 ISBN: 0962-1083 Type: 10.1111/mec.70041
ISSN
0962-1083, 1365-294X
, 2025 — FiveYear Time Series Reveals ShortTerm Blooms of Planktonic Fungi in a Coastal Mediterranean Site. Environmental Microbiology Reports vol. 17, n° 4, e70154
ISSN
1758-2229, 1758-2229
, 2025 — Do trophic strategies shape biogeography and environmental niches? Marine dinoflagellates as a case study. Abstract Marine unicellular eukaryotes (protists) exhibit a wide spectrum of trophic strategies ranging from specialists … ISME Communications vol. 5, n° 1, ycaf153
ISSN
2730-6151
, décembre 2024 — « Identification of DNA viruses in ancient DNA from herbarium samples » in Viral Metagenomics.. vol. 2732, , p. 221-234 Type: 10.1007/978-1-0716-3515-5_15
ISBN
978-1-0716-3514-8
, août 2024 — The genomic potential of photosynthesis in piconanoplankton is functionally redundant but taxonomically structured at a global scale. Carbon fixation is a key metabolic function shaping marine life, but the underlying taxonomic and functional diversity involved… Science Advances vol. 10, n° 33, eadl0534 Accession Number: 39151014 ISBN: 2375-2548 Type: 10.1126/sciadv.adl0534
, décembre 2023 — Picoeukaryotic photosynthetic potential is functionally redundant but taxonomically structured at global scale. Abstract Primary production, performed by RUBISCO, and often associated with carbon concentration mechanisms, is of major… , , Type: 10.1101/2023.09.22.558943
, juin 2023 — « Functional trait-based approaches as a common framework for aquatic ecologists: Synthesis and recent results » in ALSO Aquatic Sciences Meeting.. Aquatic ecologists face challenges in identifying the general rules of the functioning of ecosystems. A common framework,… Limnology and Oceanography vol. 66, n° 3, p. 965-994 Type: 10.1002/lno.11655
, 2023 — Beyond the limits of the unassigned protist microbiome: inferring large-scale spatio-temporal patterns of Syndiniales marine parasites. Abstract Marine protists are major components of the oceanic microbiome that remain largely unrepresented in culture… ISME Communications vol. 3, n° 1, p. 16
ISSN
2730-6151
, 2022 — Genomic differentiation of three picophytoplankton species in the Mediterranean Sea. Environmental Microbiology vol. 24, n° 12, p. 6086-6099
ISSN
1462-2912, 1462-2920
, 2021 — Towards omics-based predictions of planktonic functional composition from environmental data. Abstract Marine microbes play a crucial role in climate regulation,
biogeochemical cycles, and trophic networks. Unprecedented… Nature Communications vol. 12, n° 1, p. 4361
ISSN
2041-1723
, mars 2020 — A resource-frugal probabilistic dictionary and applications in bioinformatics. Discrete Applied Mathematics vol. 274, , p. 92-102
ISSN
0166218X
, septembre 2019 — « L’expédition Tara Océans, un rêve de marin, de science et de partage » in Sciences. Bâtir de nouveaux mondes... , ,
ISBN
978-2-271-12626-9
, juin 2019 — « Functional trait-based approaches as a common framework for freshwater and marine ecologists » in 11th Symposium for European Freshwater Sciences (SEFS).. , ,