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Boitard S., Rodriguez W., Jay F., Mona S. & Austerlitz F., 2016 — Inferring Population Size History from Large Samples of Genome-Wide Molecular Data - An Approximate Bayesian Computation Approach. PLoS Genetics vol. 12, n° 3, e1005877

ISSN

1553-7404 (Electronic) 1553-7390 (Linking)

https://dx.doi.org/10.1371/journal.pgen.1005877 PGENETICS-D-15-00798 [pii]

Maisano Delser Pierpaolo, Corrigan Shannon, Hale Matthew, Li Chenhong, Veuille Michel, Planes Serge, Naylor Gavin & Mona Stefano, 2016 — Population genomics of C. melanopterus using target gene capture data: demographic inferences and conservation perspectives. Scientific Reports vol. 6, , p. 33753

https://doi.org/10.1038/srep33753

Gilabert A., Rasigade J.-P. & Wirth Thierry, 2017 — « Microbes as tracers of past human demography and migrations » in Genetics and Evolution of Infectious Diseases, 2nd Edition.. , , p. 141-165

Lalis A., Mona S., Stoetzel E., Bonhomme F., Souttou K., Ouarour A., Aulagnier S., Denys C. & Nicolas V., 2018 — Out of Africa: demographic and colonization history of the Algerian mouse (Mus spretus Lataste). Heredity (Edinb) , ,

ISSN

1365-2540 (Electronic) 0018-067X (Linking)

https://dx.doi.org/10.1038/s41437-018-0089-7 10.1038/s41437-018-0089-7 [pii]

Franssen Susanne U, Durrant Caroline, Stark Olivia, Moser Bettina, Downing Tim, Imamura Hideo, Dujardin Jean-Claude, Sanders Mandy J, Mauricio Isabel, Miles Michael A, Schnur Lionel F, Jaffe Charles L, Nasereddin Abdelmajeed, Schallig Henk, Yeo Matthew et al., 2020 — Global genome diversity of the Leishmania donovani complex. eLife vol. 9, , e51243

ISSN

2050-084X

https://dx.doi.org/10.7554/eLife.51243

Khimoun Aurélie, Doums Claudie, Molet M., Kaufmann Bernard, Péronnet R., Eyer P.A. & Mona S., 2020 — Urbanization without isolation: the absence of genetic structure among cities and forests in the tiny acorn ant Temnothorax nylanderi. Biology Letters vol. 16, n° 1, p. 20190741 Publisher: Royal Society, The tex.hal_id: hal-02464191 tex.hal_version: v1

ISSN

1744-9561, 1744-957X

https://dx.doi.org/10.1098/rsbl.2019.0741

Doums C & Monnin T, 2020 — To have and not to have sex: When multiple evolutions of conditional use of sex elegantly solve the question in the ant genus Cataglyphis. MOLECULAR ECOLOGY vol. 29, n° 3, p. 445-447

ISSN

0962-1083

https://dx.doi.org/10.1111/mec.15352

Delrieu-Trottin Erwan, Hubert Nicolas, Giles Emily C., Chifflet-Belle Pascaline, Suwalski Arnaud, Neglia Valentina, Rapu-Edmunds Cristian, Mona Stefano & Saenz-Agudelo Pablo, 2020 — Coping with Pleistocene climatic fluctuations: Demographic responses in remote endemic reef fishes. Molecular Ecology vol. 29, n° 12, p. 2218-2233

ISSN

0962-1083, 1365-294X

https://dx.doi.org/10.1111/mec.15478

Maisano Delser Pierpaolo, Corrigan Shannon, Duckett Drew, Suwalski Arnaud, Veuille Michel, Planes Serge, Naylor Gavin J. P. & Mona Stefano, 2019 — Demographic inferences after a range expansion can be biased: the test case of the blacktip reef shark (Carcharhinus melanopterus). Heredity vol. 122, n° 6, p. 759-769 tex.eissn: 1365-2540 tex.orcid-numbers: Delser, Pierpaolo Maisano/0000-0002-1844-1715 Corrigan, Shannon/0000-0003-0093-5028 Mona, Stefano/0000-0001-9087-0656 tex.researcherid-numbers: Delser, Pierpaolo Maisano/M-6229-2019 Mona, Stefano/AAF-5061-2019 Corri

ISSN

0018-067X, 1365-2540

https://dx.doi.org/10.1038/s41437-018-0164-0

Delrieu-Trottin Erwan, Brosseau-Acquaviva Laura, Mona Stefano, Neglia Valentina, Giles Emily C., Rapu-Edmunds Cristian & Saenz-Agudelo Pablo, 2019 — Understanding the origin of the most isolated endemic reef fish fauna of the IndoPacific: Coral reef fishes of Rapa Nui. Journal of Biogeography vol. 46, n° 4, p. 723-733

ISSN

0305-0270, 1365-2699

https://dx.doi.org/10.1111/jbi.13531

Kohl Thomas A., Kranzer Katharina, Andres Sönke, Wirth Thierry, Niemann Stefan & Moser Irmgard, 2020 — Population Structure of Mycobacterium bovis in Germany: a Long-Term Study Using Whole-Genome Sequencing Combined with Conventional Molecular Typing Methods. Journal of Clinical Microbiology vol. 58, n° 11, e01573–20, /jcm/58/11/JCM.01573–20.atom

ISSN

0095-1137, 1098-660X

https://dx.doi.org/10.1128/JCM.01573-20

Wirth Thierry, juillet 2020 — Applied phyloepidemiology: Detecting drivers of pathogen transmission from genomic signatures using density measures. AbstractUnderstanding the driving forces of an epidemic is key to inform intervention strat- egies against it. Correlating… Evolutionary Applications vol. 13, n° 6, p. 1513-1525 ISBN: 1752-4563 Publisher: Blackwell Type: 10.1111/eva.12991

ISSN

1752-4571, 1752-4571

https://dx.doi.org/10.1111/eva.12991

Wirth Thierry, Bergot Marine, Rasigade Jean-Philippe, Pichon Bruno, Barbier Maxime, Martins-Simoes Patricia, Jacob Laurent, Pike Rachel, Tissieres Pierre, Picaud Jean-Charles, Kearns Angela, Supply Philip, Butin Marine & Laurent Frédéric, mai 2020 — Niche specialization and spread of Staphylococcus capitis involved in neonatal sepsis. Nature Microbiology vol. 5, n° 5, p. 735-745

ISSN

2058-5276

https://dx.doi.org/10.1038/s41564-020-0676-2

Duntsch Laura, Tomotani Barbara M., Villemereuil Pierre, Brekke Patricia, Lee Kate D., Ewen John G. & Santure Anna W., 2020 — Polygenic basis for adaptive morphological variation in a threatened Aotearoa New Zealand bird, the hihi ( Notiomystis cincta ). Proceedings of the Royal Society B: Biological Sciences vol. 287, n° 1933, p. 20200948

ISSN

0962-8452, 1471-2954

https://dx.doi.org/10.1098/rspb.2020.0948

Andrello Marco, Villemereuil Pierre, Carboni Marta, Busson Delphine, Fortin Marie-Josée, Gaggiotti Oscar E. & Till-Bottraud Irène, 2020 — Accounting for stochasticity in demographic compensation along the elevational range of an alpine plant. Ecology Letters vol. 23, n° 5, p. 870-880

ISSN

1461-023X, 1461-0248

https://dx.doi.org/10.1111/ele.13488

Rutschmann Alexis, Rozen-Rechels David, Dupoué Andreaz, Blaimont Pauline, de Villemereuil Pierre, Miles Donald, Richard Murielle & Clobert Jean, 2020 — Climate dependent heating efficiency in the common lizard. Ecology and Evolution vol. 10, n° 15, p. 8007-8017

ISSN

2045-7758

https://dx.doi.org/10.1002/ece3.6241

Nattier Romain, Michel-Salzat Alice, Almeida Lucia M., Chifflet-Belle Pascaline, Magro Alexandra, Salazar Karen & Kergoat Gael J., 2021 — Phylogeny and divergence dating of the ladybird beetle tribe Coccinellini Latreille (Coleoptera: Coccinellidae: Coccinellinae). Systematic Entomology vol. 46, , p. 632-648

ISSN

0307-6970, 1365-3113

https://dx.doi.org/10.1111/syen.12480

Wirth Thierry, octobre 2021 — When specialized clones go global. Nature Microbiology vol. 6, n° 10, p. 1215-1216

ISSN

2058-5276

https://dx.doi.org/10.1038/s41564-021-00967-z

Moura Alexandra, Lefrancq Noémie, Leclercq Alexandre, Wirth Thierry, Borges Vítor, Gilpin Brent, Dallman Timothy, Frey Joachim, Franz Eelco, Nielsen Eva, Thomas Juno, Pightling Arthur, Howden Benjamin, Tarr Cheryl, Gerner-Smidt Peter et al., décembre 2020 — Emergence and global spread of Listeria monocytogenes main clinical clonal complex. Retracing microbial emergence and spread is essential to understanding the evolution and dynamics of pathogens. The bacterial… Science Advances vol. 7, n° 49, eabj9805 Type: 10.1101/2020.12.18.423387

ISSN

2375-2548

https://dx.doi.org/10.1126/sciadv.abj9805

Alili Rohia, Belda Eugeni, Le Phuong, Wirth Thierry, Zucker Jean-Daniel, Prifti Edi & Clément Karine, 2021 — Exploring Semi-Quantitative Metagenomic Studies Using Oxford Nanopore Sequencing: A Computational and Experimental Protocol. Genes vol. 12, n° 10, p. 1496

ISSN

2073-4425

https://dx.doi.org/10.3390/genes12101496

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