Entité de rattachement
Evolution et Développement des Variations Phénotypiques (EDVP)
Recherches
Habilité(e) à diriger des recherches

Contact

Courriel
mlopez [at] mnhn.fr
Téléphone
01 40 79 36 74
Adresse(s)

12 rue Buffon

CP39

75005 Paris

Présentation

Research interests

I am an evolutionary biologist interested in using fungi as models to study experimentally subjects as the evolution of host-parasite interactions, adaptation, domestication and the evolution of sex.

 

 

Publications avant 2014

  • de Vienne, D. M., Refrégier, G., López-Villavicencio, M., Tellier, A., Hood, M. E., & Giraud, T. (2013). Cospeciation vs host-shift speciation: methods for testing, evidence from natural associations and relation to coevolution. New Phytologist, 198(2), 347‑385. https://doi.org/10.1111/nph.12150
  • López-Villavicencio, M., Debets, A. J. M., Slakhorst, M., Giraud, T., & Schoustra, S. E. (2013). Deleterious effects of recombination and possible nonrecombinatorial advantages of sex in a fungal model. Journal of Evolutionary Biology, 26(9), 1968‑1978. https://doi.org/10.1111/jeb.12196
  • Billiard, S., López-Villavicencio, M., Hood, M. E., & Giraud, T. (2012). Sex, outcrossing and mating types: unsolved questions in fungi and beyond: Sexy fungi. Journal of Evolutionary Biology, 25(6), 1020‑1038. https://doi.org/10.1111/j.1420-9101.2012.02495.x
  • Ropars, J., Dupont, J., Fontanillas, E., Rodríguez de la Vega, R. C., Malagnac, F., Coton, M., Giraud, T., & López-Villavicencio, M. (2012). Sex in Cheese: Evidence for Sexuality in the Fungus Penicillium roqueforti. PLoS ONE, 7(11), e49665.https://doi.org/10.1371/journal.pone.0049665
  • Billiard, Sylvain, López-Villavicencio, M., Devier, B., Hood, M. E., Fairhead, C., & Giraud, T. (2011). Having sex, yes, but with whom? Inferences from fungi on the evolution of anisogamy and mating types. Biological Reviews, 86(2), 421‑442. https://doi.org/10.1111/j.1469-185X.2010.00153.
  • López-Villavicencio, M., Aguileta, G., Giraud, T., de Vienne, D. M., Lacoste, S., Couloux, A., & Dupont, J. (2010). Sex in Penicillium: Combined phylogenetic and experimental approaches. Fungal Genetics and Biology, 47(8), 693‑706. https://doi.org/10.1016/j.fgb.2010.05.002
  • Giraud, T., Yockteng, R., Marthey, S., Chiapello, H., Jonot, O., López-Villavicencio, M., De Vienne, D. M., Hood, M. E., Refregier, G., Gendrault-Jacquemard, A., Wincker, P., & Dossat, C. (2008). Permanent Genetic Resources: Isolation of 60 polymorphic microsatellite loci in EST libraries of four sibling species of the phytopathogenic fungal complex Microbotryum: PERMANENT GENETIC RESOURCES. Molecular Ecology Resources, 8(2), 387‑392. https://doi.org/10.1111/j.1471-8286.2007.01967.x
  • Giraud, Tatiana, Yockteng, R., López-Villavicencio, M., Refrégier, G., & Hood, M. E. (2008). Mating System of the Anther Smut Fungus Microbotryum violaceum : Selfing under Heterothallism. Eukaryotic Cell, 7(5), 765‑775. https://doi.org/10.1128/EC.00440-07
  • Marthey, S., Aguileta, G., Rodolphe, F., Gendrault, A., Giraud, T., Fournier, E., López-Villavicencio, M., Gautier, A., Lebrun, M.-H., & Chiapello, H. (2008). Funybase: a Fungal phylogenomic database. BMC Bioinformatics, 9(1), 456. https://doi.org/10.1186/1471-2105-9-456
  • López-Villavicencio, Manuela, Jonot, O., Coantic, A., Hood, M. E., Enjalbert, J., & Giraud, T. (2007). Multiple Infections by the Anther Smut Pathogen Are Frequent and Involve Related Strains. PLoS Pathogens, 3(11), e176. https://doi.org/10.1371/journal.ppat.0030176
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  • López-Villavicencio, M., Branca, A., Giraud, T., & Shykoff, J. A. (2005). Sex-specific effect of Microbotryum violaceum (Uredinales) spores on healthy plants of the gynodioecious Gypsophila repens (Caryophyllaceae). American Journal of Botany, 92(5), 896‑900. https://doi.org/10.3732/ajb.92.5.896
  • López-Villavicencio, M., Enjalbert, J., Hood, M. E., Shykoff, J. A., Raquin, C., & Giraud, T. (2005). The anther smut disease on Gypsophila repens: a case of parasite sub-optimal performance following a recent host shift?: Sub-optimal performance following a recent host shift. Journal of Evolutionary Biology, 18(5), 1293‑1303. https://doi.org/10.1111/j.1420-9101.2005.00924.x
  • López-Villavicencio, M., Genton, B. j., Porcher, E., & Shykoff, J. A. (2005). The Role of Pollination Level on the Reproduction of Females and Hermaphrodites in the Gynodioecious Plant Gypsophila repens (Caryophyllaceae). botanical sociéty of América, 92(12), 1995‑2002. Consulté à l’adresse : https://www.jstor.org/stable/4125533
  • Valverde, T., Quijas, S., López-Villavicencio, M., & Castillo, S. (2004). Population dynamics of Mammillaria magnimamma Haworth. (Cactaceae) in a lava-field in central Mexico. Plant Ecology (Formerly Vegetatio), 170(2), 167‑184. https://doi.org/10.1023/B:VEGE.0000021662.78634.de
  • López‐Villavicencio, M., Collin, C. L., & Shykoff, J. A. (2003). No Evidence of Sex‐Differential Pollen Limitation at the Flower Level in the Gynodioecious Gypsophila repens Infected by Microbotryum violaceum. International Journal of Plant Sciences, 164(6), 899‑905. https://doi.org/10.1086/378654
  • Shykoff, J. A., Kolokotronis, S.-O., Collin, C. L., & López-Villavicencio, M. (2003). Effects of male sterility on reproductive traits in gynodioecious plants: a meta-analysis. Oecologia, 135(1), 1‑9. https://doi.org/10.1007/s00442-002-1133-z

 

 

Publications

2023
  • Bastide Héloïse, López-Villavicencio Manuela, Ogereau David, Lledo Joanna, Dutrillaux Anne-Marie, Debat Vincent & Llaurens Violaine, 2023Genome assembly of 3 Amazonian Morpho butterfly species reveals Z-chromosome rearrangements between closely related species living in sympatry. The genomic processes enabling speciation and species coexistence in sympatry are still largely unknown. Here we describe the… GigaScience vol. 12, , ISBN: 2047-217X Type: 10.1093/gigascience/giad033
  • Bastide Héloïse, López-Villavicencio Manuela, Ogereau David, Lledo Joanna, Dutrillaux Anne-Marie, Debat Vincent & Llaurens Violaine, 2023Genome assembly of 3 Amazonian Morpho butterfly species reveals Z-chromosome rearrangements between closely related species living in sympatry. The genomic processes enabling speciation and species coexistence in sympatry are still largely unknown. Here we describe the… GigaScience vol. 12, , ISBN: 2047-217X Type: 10.1093/gigascience/giad033
2018
  • Seudre Oceane, Namias Alice, Gardena Olivia, Da Silva Guillaume, Gouyon Pierre-Henri & Lopez-Villavicencio Manuela, 2018Why outcross? The abandon-ship hypothesis in a facultative outcrossing/selfing fungal species. Fungal Genetics and Biology vol. 120, , p. 1-8
    ISSN
    1087-1845
2017
  • Ropars Jeanne, López-Villavicencio Manuela, Snirc Alodie, Lacoste Sandrine & Giraud Tatiana, 2017Blue cheese-making has shaped the population genetic structure of the mould Penicillium roqueforti. PLoS One vol. 12, n° 3, e0171387
    ISSN
    1932-6203
2016
  • Ropars Jeanne, Lo Ying-Chu, Dumas Emilie, Snirc Alodie, Begerow Dominik, Rollnik Tanja, Lacoste Sandrine, Dupont Joelle, Giraud Tatiana & Lopez-Villavicencio Manuela, 2016Fertility depression among cheese-making Penicillium roqueforti strains suggests degeneration during domestication. Evolution vol. 70, n° 9, p. 2099-2109
    ISSN
    0014-3820
  • Ropars Jeanne, de la Vega Ricardo C. Rodriguez, López-Villavicencio Manuela, Dupont Joelle, Swennen Dominique, Dumas Emilie, Giraud Tatiana & Branca Antoine, 2016« Diversity and mechanisms of genomic adaptation in Penicillium » in Aspergillus and Penicillium in the Post-Genomic Era.. , , dir. Caister Academic Press p. 27-42
    ISBN
    978-1-910190-39-5
2015
  • Gillot Guillaume, Jany Jean-Luc, Coton Monika, Le Floch Gaetan, Debaets Stella, Ropars Jeanne, López-Villavicencio Manuela, Dupont Joelle, Branca Antoine, Giraud Tatiana & Coton Emmanuel, 2015Insights into Penicillium roqueforti Morphological and Genetic Diversity. PLoS One vol. 10, n° 6, e0129849 WOS:000356835000067
    ISSN
    1932-6203
  • Ropars Jeanne, de la Vega Ricardo C. Rodriguez, López-Villavicencio Manuela, Gouzy Jerome, Sallet Erika, Dumas Emilie, Lacoste Sandrine, Debuchy Robert, Dupont Joelle, Branca Antoine & Giraud Tatiana, 2015Adaptive Horizontal Gene Transfers between Multiple Cheese-Associated Fungi. Current Biology vol. 25, n° 19, p. 2562-2569
    ISSN
    0960-9822
2014
  • Ropars Jeanne, López-Villavicencio Manuela, Dupont Joëlle, Snirc Alodie, Gillot Guillaume, Coton Monika, Jany Jean-Luc, Coton Emmanuel & Giraud Tatiana, 2014Induction of sexual reproduction and genetic diversity in the cheese fungus Penicillium roqueforti. Evolutionary Applications vol. 7, n° 4, p. 433-441
    ISSN
    17524571
  • Buono Lorenza, López-Villavicencio Manuela, Shykoff Jacqui A., Snirc Alodie & Giraud Tatiana, 2014Influence of Multiple Infection and Relatedness on Virulence: Disease Dynamics in an Experimental Plant Population and Its Castrating Parasite. Plos One vol. 9, n° 6, e98526 WOS:000336911400062
    ISSN
    1932-6203